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RANBP2 англ RAN binding protein 2 білок який кодується однойменним геном розташованим у людей на короткому плечі 2 ї хро

RANBP2

RANBP2

RANBP2 (англ. RAN binding protein 2) – білок, який кодується однойменним геном, розташованим у людей на короткому плечі 2-ї хромосоми. Довжина поліпептидного ланцюга білка становить 3 224 амінокислот, а молекулярна маса — 358 199.

RANBP2
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Наявні структури
PDBПошук ортологів: PDBe RCSB
Ідентифікатори
Символи RANBP2, ADANE, ANE1, IIAE3, NUP358, TRP1, TRP2, RAN binding protein 2
Зовнішні ІД OMIM: 601181 MGI: 894323 HomoloGene: 136803 GeneCards: RANBP2
Шаблон експресії
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Більше даних
Ортологи
Види Людина Миша
Entrez
5903
19386
Ensembl
ENSG00000153201
ENSMUSG00000003226
UniProt
P49792
Q9ERU9
RefSeq (мРНК)
NM_006267
NM_011240
RefSeq (білок)
NP_006258
NP_035370
Локус (UCSC) Хр. 2: 108.72 – 108.79 Mb Хр. 10: 58.28 – 58.33 Mb
PubMed search
Вікідані
Див./Ред. для людейДив./Ред. для мишей
Послідовність амінокислот
1020304050
MRRSKADVERYIASVQGSTPSPRQKSMKGFYFAKLYYEAKEYDLAKKYIC
TYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKI
AELLCKNDVTDGRAKYWLERAAKLFPGSPAIYKLKEQLLDCEGEDGWNKL
FDLIQSELYVRPDDVHVNIRLVEVYRSTKRLKDAVAHCHEAERNIALRSS
LEWNSCVVQTLKEYLESLQCLESDKSDWRATNTDLLLAYANLMLLTLSTR
DVQESRELLQSFDSALQSVKSLGGNDELSATFLEMKGHFYMHAGSLLLKM
GQHSSNVQWRALSELAALCYLIAFQVPRPKIKLIKGEAGQNLLEMMACDR
LSQSGHMLLNLSRGKQDFLKEIVETFANKSGQSALYDALFSSQSPKDTSF
LGSDDIGNIDVREPELEDLTRYDVGAIRAHNGSLQHLTWLGLQWNSLPAL
PGIRKWLKQLFHHLPHETSRLETNAPESICILDLEVFLLGVVYTSHLQLK
EKCNSHHSSYQPLCLPLPVCKQLCTERQKSWWDAVCTLIHRKAVPGNVAK
LRLLVQHEINTLRAQEKHGLQPALLVHWAECLQKTGSGLNSFYDQREYIG
RSVHYWKKVLPLLKIIKKKNSIPEPIDPLFKHFHSVDIQASEIVEYEEDA
HITFAILDAVNGNIEDAVTAFESIKSVVSYWNLALIFHRKAEDIENDALS
PEEQEECKNYLRKTRDYLIKIIDDSDSNLSVVKKLPVPLESVKEMLNSVM
QELEDYSEGGPLYKNGSLRNADSEIKHSTPSPTRYSLSPSKSYKYSPKTP
PRWAEDQNSLLKMICQQVEAIKKEMQELKLNSSNSASPHRWPTENYGPDS
VPDGYQGSQTFHGAPLTVATTGPSVYYSQSPAYNSQYLLRPAANVTPTKG
PVYGMNRLPPQQHIYAYPQQMHTPPVQSSSACMFSQEMYGPPALRFESPA
TGILSPRGDDYFNYNVQQTSTNPPLPEPGYFTKPPIAAHASRSAESKTIE
FGKTNFVQPMPGEGLRPSLPTQAHTTQPTPFKFNSNFKSNDGDFTFSSPQ
VVTQPPPAAYSNSESLLGLLTSDKPLQGDGYSGAKPIPGGQTIGPRNTFN
FGSKNVSGISFTENMGSSQQKNSGFRRSDDMFTFHGPGKSVFGTPTLETA
NKNHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAK
LFRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISP
DMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTPEEAALFKCKFEE
AQSILKAPGTNVAMASNQAVRIVKEPTSHDNKDICKSDAGNLNFEFQVAK
KEGSWWHCNSCSLKNASTAKKCVSCQNLNPSNKELVGPPLAETVFTPKTS
PENVQDRFALVTPKKEGHWDCSICLVRNEPTVSRCIACQNTKSANKSGSS
FVHQASFKFGQGDLPKPINSDFRSVFSTKEGQWDCSACLVQNEGSSTKCA
ACQNPRKQSLPATSIPTPASFKFGTSETSKTLKSGFEDMFAKKEGQWDCS
SCLVRNEANATRCVACQNPDKPSPSTSVPAPASFKFGTSETSKAPKSGFE
GMFTKKEGQWDCSVCLVRNEASATKCIACQNPGKQNQTTSAVSTPASSET
SKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQNPGKQNQTTSA
VSTPASSETSKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQCP
SKQNQTTAISTPASSEISKAPKSGFEGMFIRKGQWDCSVCCVQNESSSLK
CVACDASKPTHKPIAEAPSAFTLGSEMKLHDSSGSQVGTGFKSNFSEKAS
KFGNTEQGFKFGHVDQENSPSFMFQGSSNTEFKSTKEGFSIPVSADGFKF
GISEPGNQEKKSEKPLENGTGFQAQDISGQKNGRGVIFGQTSSTFTFADL
AKSTSGEGFQFGKKDPNFKGFSGAGEKLFSSQYGKMANKANTSGDFEKDD
DAYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEVS
QWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSG
SDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIP
LQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVTEEENKGSG
TGAAGASDTTIKPNPENTGPTLEWDNYDLREDALDDSVSSSSVHASPLAS
SPVRKNLFRFGESTTGFNFSFKSALSPSKSPAKLNQSGTSVGTDEESDVT
QEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWK
ERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMTLQNMKGTER
VWLWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEKDSLIT
PHVSRSSTPRESPCGKIAVAVLEETTRERTDVIQGDDVADATSEVEVSST
SETTPKAVVSPPKFVFGSESVKSIFSSEKSKPFAFGNSSATGSLFGFSFN
APLKSNNSETSSVAQSGSESKVEPKKCELSKNSDIEQSSDSKVKNLFASF
PTEESSINYTFKTPEKAKEKKKPEDSPSDDDVLIVYELTPTAEQKALATK
LKLPPTFFCYKNRPDYVSEEEEDDEDFETAVKKLNGKLYLDGSEKCRPLE
ENTADNEKECIIVWEKKPTVEEKAKADTLKLPPTFFCGVCSDTDEDNGNG
EDFQSELQKVQEAQKSQTEEITSTTDSVYTGGTEVMVPSFCKSEEPDSIT
KSISSPSVSSETMDKPVDLSTRKEIDTDSTSQGESKIVSFGFGSSTGLSF
ADLASSNSGDFAFGSKDKNFQWANTGAAVFGTQSVGTQSAGKVGEDEDGS
DEEVVHNEDIHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDVSQW
KERGVGDIKILWHTMKNYYRILMRRDQVFKVCANHVITKTMELKPLNVSN
NALVWTASDYADGEAKVEQLAVRFKTKEVADCFKKTFEECQQNLMKLQKG
HVSLAAELSKETNPVVFFDVCADGEPLGRITMELFSNIVPRTAENFRALC
TGEKGFGFKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDV
KHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVK
KIESFGSPKGSVCRRITITECGQI

Кодований геном білок за функціями належить до лігаз, фосфопротеїнів. Задіяний у таких біологічних процесах як транспорт, транспорт білків, убіквітинування білків, транспорт мРНК, транслокація, поліморфізм, ацетиляція. Білок має сайт для зв'язування з іонами металів, іоном цинку, РНК. Локалізований у ядрі, мембрані, комплексі ядерної пори.

Література

  • Wu J., Matunis M.J., Kraemer D., Blobel G., Coutavas E. (1995). Nup358, a cytoplasmically exposed nucleoporin with peptide repeats, Ran-GTP binding sites, zinc fingers, a cyclophilin A homologous domain, and a leucine-rich region. J. Biol. Chem. 270: 14209—14213. PMID 7775481 DOI:10.1074/jbc.270.23.14209
  • Beddow A.L., Richards S.A., Orem N.R., Macara I.G. (1995). The Ran/TC4 GTPase-binding domain: identification by expression cloning and characterization of a conserved sequence motif. Proc. Natl. Acad. Sci. U.S.A. 92: 3328—3332. PMID 7724562 DOI:10.1073/pnas.92.8.3328
  • Pichler A., Gast A., Seeler J.S., Dejean A., Melchior F. (2002). The nucleoporin RanBP2 has SUMO1 E3 ligase activity. Cell. 108: 109—120. PMID 11792325 DOI:10.1016/S0092-8674(01)00633-X
  • Frosst P., Guan T., Subauste C., Hahn K., Gerace L. (2002). Tpr is localized within the nuclear basket of the pore complex and has a role in nuclear protein export. J. Cell Biol. 156: 617—630. PMID 11839768 DOI:10.1083/jcb.200106046
  • Pichler A., Knipscheer P., Saitoh H., Sixma T.K., Melchior F. (2004). The RanBP2 SUMO E3 ligase is neither HECT- nor RING-type. Nat. Struct. Mol. Biol. 11: 984—991. PMID 15378033 DOI:10.1038/nsmb834
  • Song J., Durrin L.K., Wilkinson T.A., Krontiris T.G., Chen Y. (2004). Identification of a SUMO-binding motif that recognizes SUMO-modified proteins. Proc. Natl. Acad. Sci. U.S.A. 101: 14373—14378. PMID 15388847 DOI:10.1073/pnas.0403498101

Примітки

  1. Human PubMed Reference:.
  2. Mouse PubMed Reference:.
  3. HUGO Gene Nomenclature Commitee, HGNC:9848 (англ.) . Процитовано 28 серпня 2017.
  4. (англ.) . Архів оригіналу за 31 серпня 2017. Процитовано 28 серпня 2017.

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RANBP2 angl RAN binding protein 2 bilok yakij koduyetsya odnojmennim genom roztashovanim u lyudej na korotkomu plechi 2 yi hromosomi Dovzhina polipeptidnogo lancyuga bilka stanovit 3 224 aminokislot a molekulyarna masa 358 199 RANBP2Nayavni strukturiPDBPoshuk ortologiv PDBe RCSB Spisok kodiv PDB1RRP 1XKE 1Z5S 3UIN 3UIO 3UIP 4I9Y 4L6E 4LQW 5CLL 5CLQ 2LASIdentifikatoriSimvoliRANBP2 ADANE ANE1 IIAE3 NUP358 TRP1 TRP2 RAN binding protein 2Zovnishni ID OMIM 601181 MGI 894323 HomoloGene 136803 GeneCards RANBP2Ontologiya genaMolekulyarna funkciya peptidyl prolyl cis trans isomerase activity zv yazuvannya z ionom metalu ligase activity GO 0001948 GO 0016582 protein binding RNA binding SUMO transferase activity GO 0005097 GO 0005099 GO 0005100 GTPase activator activity GO 0032403 protein containing complex binding cyclosporin A binding transferase activityKlitinna komponenta gialoplazma yaderna membrana membrana yaderna pora nuclear inclusion body nuclear pore nuclear basket klitinne yadro nuclear envelope lamellae anulatae vnutrishnoklitinna membranna organela citoplazma centrosoma mitohondriya nuclear pore cytoplasmic filaments cytoplasmic periphery of the nuclear pore complex host cellBiologichnij proces mRNA transport viral transcription intracellular transport protein sumoylation protein peptidyl prolyl isomerization mitotic nuclear membrane disassembly zgortannya bilkiv regulation of cellular response to heat protein transport GO 0022415 viral process NLS bearing protein import into nucleus GO 0046795 intracellular transport of virus mRNA export from nucleus tRNA export from nucleus sister chromatid cohesion centrosome localization G1 phase RNA export from nucleus ubiquitin dependent protein catabolic process GO 0043146 spindle organization GO 0032320 GO 0032321 GO 0032855 GO 0043089 GO 0032854 positive regulation of GTPase activity positive regulation of mitotic centrosome separation response to amphetamine positive regulation of glucokinase activity GO 1905616 regulation of gene silencing by miRNA regulation of glycolytic process GO 0015915 transport regulation of gluconeogenesisDzherela Amigo QuickGOShablon ekspresiyiBilshe danihOrtologiVidi Lyudina MishaEntrez5903 19386Ensembl ENSG00000153201 ENSMUSG00000003226UniProt P49792 Q9ERU9RefSeq mRNK NM 006267NM 011240RefSeq bilok NP 006258NP 035370Lokus UCSC Hr 2 108 72 108 79 MbHr 10 58 28 58 33 MbPubMed searchVikidaniDiv Red dlya lyudejDiv Red dlya mishej Poslidovnist aminokislot1020304050 MRRSKADVERYIASVQGSTPSPRQKSMKGFYFAKLYYEAKEYDLAKKYIC TYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKI AELLCKNDVTDGRAKYWLERAAKLFPGSPAIYKLKEQLLDCEGEDGWNKL FDLIQSELYVRPDDVHVNIRLVEVYRSTKRLKDAVAHCHEAERNIALRSS LEWNSCVVQTLKEYLESLQCLESDKSDWRATNTDLLLAYANLMLLTLSTR DVQESRELLQSFDSALQSVKSLGGNDELSATFLEMKGHFYMHAGSLLLKM GQHSSNVQWRALSELAALCYLIAFQVPRPKIKLIKGEAGQNLLEMMACDR LSQSGHMLLNLSRGKQDFLKEIVETFANKSGQSALYDALFSSQSPKDTSF LGSDDIGNIDVREPELEDLTRYDVGAIRAHNGSLQHLTWLGLQWNSLPAL PGIRKWLKQLFHHLPHETSRLETNAPESICILDLEVFLLGVVYTSHLQLK EKCNSHHSSYQPLCLPLPVCKQLCTERQKSWWDAVCTLIHRKAVPGNVAK LRLLVQHEINTLRAQEKHGLQPALLVHWAECLQKTGSGLNSFYDQREYIG RSVHYWKKVLPLLKIIKKKNSIPEPIDPLFKHFHSVDIQASEIVEYEEDA HITFAILDAVNGNIEDAVTAFESIKSVVSYWNLALIFHRKAEDIENDALS PEEQEECKNYLRKTRDYLIKIIDDSDSNLSVVKKLPVPLESVKEMLNSVM QELEDYSEGGPLYKNGSLRNADSEIKHSTPSPTRYSLSPSKSYKYSPKTP PRWAEDQNSLLKMICQQVEAIKKEMQELKLNSSNSASPHRWPTENYGPDS VPDGYQGSQTFHGAPLTVATTGPSVYYSQSPAYNSQYLLRPAANVTPTKG PVYGMNRLPPQQHIYAYPQQMHTPPVQSSSACMFSQEMYGPPALRFESPA TGILSPRGDDYFNYNVQQTSTNPPLPEPGYFTKPPIAAHASRSAESKTIE FGKTNFVQPMPGEGLRPSLPTQAHTTQPTPFKFNSNFKSNDGDFTFSSPQ VVTQPPPAAYSNSESLLGLLTSDKPLQGDGYSGAKPIPGGQTIGPRNTFN FGSKNVSGISFTENMGSSQQKNSGFRRSDDMFTFHGPGKSVFGTPTLETA NKNHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAK LFRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISP DMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTPEEAALFKCKFEE AQSILKAPGTNVAMASNQAVRIVKEPTSHDNKDICKSDAGNLNFEFQVAK KEGSWWHCNSCSLKNASTAKKCVSCQNLNPSNKELVGPPLAETVFTPKTS PENVQDRFALVTPKKEGHWDCSICLVRNEPTVSRCIACQNTKSANKSGSS FVHQASFKFGQGDLPKPINSDFRSVFSTKEGQWDCSACLVQNEGSSTKCA ACQNPRKQSLPATSIPTPASFKFGTSETSKTLKSGFEDMFAKKEGQWDCS SCLVRNEANATRCVACQNPDKPSPSTSVPAPASFKFGTSETSKAPKSGFE GMFTKKEGQWDCSVCLVRNEASATKCIACQNPGKQNQTTSAVSTPASSET SKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQNPGKQNQTTSA VSTPASSETSKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQCP SKQNQTTAISTPASSEISKAPKSGFEGMFIRKGQWDCSVCCVQNESSSLK CVACDASKPTHKPIAEAPSAFTLGSEMKLHDSSGSQVGTGFKSNFSEKAS KFGNTEQGFKFGHVDQENSPSFMFQGSSNTEFKSTKEGFSIPVSADGFKF GISEPGNQEKKSEKPLENGTGFQAQDISGQKNGRGVIFGQTSSTFTFADL AKSTSGEGFQFGKKDPNFKGFSGAGEKLFSSQYGKMANKANTSGDFEKDD DAYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEVS QWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSG SDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIP LQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVTEEENKGSG TGAAGASDTTIKPNPENTGPTLEWDNYDLREDALDDSVSSSSVHASPLAS SPVRKNLFRFGESTTGFNFSFKSALSPSKSPAKLNQSGTSVGTDEESDVT QEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWK ERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMTLQNMKGTER VWLWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEKDSLIT PHVSRSSTPRESPCGKIAVAVLEETTRERTDVIQGDDVADATSEVEVSST SETTPKAVVSPPKFVFGSESVKSIFSSEKSKPFAFGNSSATGSLFGFSFN APLKSNNSETSSVAQSGSESKVEPKKCELSKNSDIEQSSDSKVKNLFASF PTEESSINYTFKTPEKAKEKKKPEDSPSDDDVLIVYELTPTAEQKALATK LKLPPTFFCYKNRPDYVSEEEEDDEDFETAVKKLNGKLYLDGSEKCRPLE ENTADNEKECIIVWEKKPTVEEKAKADTLKLPPTFFCGVCSDTDEDNGNG EDFQSELQKVQEAQKSQTEEITSTTDSVYTGGTEVMVPSFCKSEEPDSIT KSISSPSVSSETMDKPVDLSTRKEIDTDSTSQGESKIVSFGFGSSTGLSF ADLASSNSGDFAFGSKDKNFQWANTGAAVFGTQSVGTQSAGKVGEDEDGS DEEVVHNEDIHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDVSQW KERGVGDIKILWHTMKNYYRILMRRDQVFKVCANHVITKTMELKPLNVSN NALVWTASDYADGEAKVEQLAVRFKTKEVADCFKKTFEECQQNLMKLQKG HVSLAAELSKETNPVVFFDVCADGEPLGRITMELFSNIVPRTAENFRALC TGEKGFGFKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDV KHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVK KIESFGSPKGSVCRRITITECGQI A Alanin C Cisteyin D Asparaginova kislota E Glutaminova kislota F Fenilalanin G Glicin H Gistidin I Izolejcin K Lizin L Lejcin M Metionin N Asparagin P Prolin Q Glutamin R Arginin S Serin T Treonin V Valin W Triptofan Y Tirozin Kodovanij genom bilok za funkciyami nalezhit do ligaz fosfoproteyiniv Zadiyanij u takih biologichnih procesah yak transport transport bilkiv ubikvitinuvannya bilkiv transport mRNK translokaciya polimorfizm acetilyaciya Bilok maye sajt dlya zv yazuvannya z ionami metaliv ionom cinku RNK Lokalizovanij u yadri membrani kompleksi yadernoyi pori LiteraturaWu J Matunis M J Kraemer D Blobel G Coutavas E 1995 Nup358 a cytoplasmically exposed nucleoporin with peptide repeats Ran GTP binding sites zinc fingers a cyclophilin A homologous domain and a leucine rich region J Biol Chem 270 14209 14213 PMID 7775481 DOI 10 1074 jbc 270 23 14209 Beddow A L Richards S A Orem N R Macara I G 1995 The Ran TC4 GTPase binding domain identification by expression cloning and characterization of a conserved sequence motif Proc Natl Acad Sci U S A 92 3328 3332 PMID 7724562 DOI 10 1073 pnas 92 8 3328 Pichler A Gast A Seeler J S Dejean A Melchior F 2002 The nucleoporin RanBP2 has SUMO1 E3 ligase activity Cell 108 109 120 PMID 11792325 DOI 10 1016 S0092 8674 01 00633 X Frosst P Guan T Subauste C Hahn K Gerace L 2002 Tpr is localized within the nuclear basket of the pore complex and has a role in nuclear protein export J Cell Biol 156 617 630 PMID 11839768 DOI 10 1083 jcb 200106046 Pichler A Knipscheer P Saitoh H Sixma T K Melchior F 2004 The RanBP2 SUMO E3 ligase is neither HECT nor RING type Nat Struct Mol Biol 11 984 991 PMID 15378033 DOI 10 1038 nsmb834 Song J Durrin L K Wilkinson T A Krontiris T G Chen Y 2004 Identification of a SUMO binding motif that recognizes SUMO modified proteins Proc Natl Acad Sci U S A 101 14373 14378 PMID 15388847 DOI 10 1073 pnas 0403498101PrimitkiHuman PubMed Reference Mouse PubMed Reference HUGO Gene Nomenclature Commitee HGNC 9848 angl Procitovano 28 serpnya 2017 angl Arhiv originalu za 31 serpnya 2017 Procitovano 28 serpnya 2017 Div takozhHromosoma 2 Ce nezavershena stattya pro bilki Vi mozhete dopomogti proyektu vipravivshi abo dopisavshi yiyi

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