LRPPRC (англ. Leucine rich pentatricopeptide repeat containing) – білок, який кодується однойменним геном, розташованим у людей на короткому плечі 2-ї хромосоми. Довжина поліпептидного ланцюга білка становить 1 394 амінокислот, а молекулярна маса — 157 905.
LRPPRC | |||||||||||||||||
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Ідентифікатори | |||||||||||||||||
Символи | LRPPRC, CLONE-23970, GP130, LRP130, LSFC, leucine rich pentatricopeptide repeat containing, MC4DN5 | ||||||||||||||||
Зовнішні ІД | OMIM: 607544 MGI: 1919666 HomoloGene: 32695 GeneCards: LRPPRC | ||||||||||||||||
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Шаблон експресії | |||||||||||||||||
Більше даних | |||||||||||||||||
Ортологи | |||||||||||||||||
Види | Людина | Миша | |||||||||||||||
Entrez |
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Ensembl |
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UniProt |
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RefSeq (мРНК) |
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RefSeq (білок) |
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Локус (UCSC) | Хр. 2: 43.89 – 44 Mb | Хр. 17: 85.01 – 85.1 Mb | |||||||||||||||
PubMed search | |||||||||||||||||
Вікідані | |||||||||||||||||
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10 | 20 | 30 | 40 | 50 | ||||
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MAALLRSARW | LLRAGAAPRL | PLSLRLLPGG | PGRLHAASYL | PAARAGPVAG | ||||
GLLSPARLYA | IAAKEKDIQE | ESTFSSRKIS | NQFDWALMRL | DLSVRRTGRI | ||||
PKKLLQKVFN | DTCRSGGLGG | SHALLLLRSC | GSLLPELKLE | ERTEFAHRIW | ||||
DTLQKLGAVY | DVSHYNALLK | VYLQNEYKFS | PTDFLAKMEE | ANIQPNRVTY | ||||
QRLIASYCNV | GDIEGASKIL | GFMKTKDLPV | TEAVFSALVT | GHARAGDMEN | ||||
AENILTVMRD | AGIEPGPDTY | LALLNAYAEK | GDIDHVKQTL | EKVEKSELHL | ||||
MDRDLLQIIF | SFSKAGYPQY | VSEILEKVTC | ERRYIPDAMN | LILLLVTEKL | ||||
EDVALQILLA | CPVSKEDGPS | VFGSFFLQHC | VTMNTPVEKL | TDYCKKLKEV | ||||
QMHSFPLQFT | LHCALLANKT | DLAKALMKAV | KEEGFPIRPH | YFWPLLVGRR | ||||
KEKNVQGIIE | ILKGMQELGV | HPDQETYTDY | VIPCFDSVNS | ARAILQENGC | ||||
LSDSDMFSQA | GLRSEAANGN | LDFVLSFLKS | NTLPISLQSI | RSSLLLGFRR | ||||
SMNINLWSEI | TELLYKDGRY | CQEPRGPTEA | VGYFLYNLID | SMSDSEVQAK | ||||
EEHLRQYFHQ | LEKMNVKIPE | NIYRGIRNLL | ESYHVPELIK | DAHLLVESKN | ||||
LDFQKTVQLT | SSELESTLET | LKAENQPIRD | VLKQLILVLC | SEENMQKALE | ||||
LKAKYESDMV | TGGYAALINL | CCRHDKVEDA | LNLKEEFDRL | DSSAVLDTGK | ||||
YVGLVRVLAK | HGKLQDAINI | LKEMKEKDVL | IKDTTALSFF | HMLNGAALRG | ||||
EIETVKQLHE | AIVTLGLAEP | STNISFPLVT | VHLEKGDLST | ALEVAIDCYE | ||||
KYKVLPRIHD | VLCKLVEKGE | TDLIQKAMDF | VSQEQGEMVM | LYDLFFAFLQ | ||||
TGNYKEAKKI | IETPGIRARS | ARLQWFCDRC | VANNQVETLE | KLVELTQKLF | ||||
ECDRDQMYYN | LLKLYKINGD | WQRADAVWNK | IQEENVIPRE | KTLRLLAEIL | ||||
REGNQEVPFD | VPELWYEDEK | HSLNSSSAST | TEPDFQKDIL | IACRLNQKKG | ||||
AYDIFLNAKE | QNIVFNAETY | SNLIKLLMSE | DYFTQAMEVK | AFAETHIKGF | ||||
TLNDAANSRL | IITQVRRDYL | KEAVTTLKTV | LDQQQTPSRL | AVTRVIQALA | ||||
MKGDVENIEV | VQKMLNGLED | SIGLSKMVFI | NNIALAQIKN | NNIDAAIENI | ||||
ENMLTSENKV | IEPQYFGLAY | LFRKVIEEQL | EPAVEKISIM | AERLANQFAI | ||||
YKPVTDFFLQ | LVDAGKVDDA | RALLQRCGAI | AEQTPILLLF | LLRNSRKQGK | ||||
ASTVKSVLEL | IPELNEKEEA | YNSLMKSYVS | EKDVTSAKAL | YEHLTAKNTK | ||||
LDDLFLKRYA | SLLKYAGEPV | PFIEPPESFE | FYAQQLRKLR | ENSS |
Задіяний у таких біологічних процесах як транскрипція, регуляція транскрипції, транспорт, транспорт мРНК. Білок має сайт для зв'язування з ДНК, РНК. Локалізований у ядрі, мембрані, мітохондрії.
Література
- Xu F., Morin C., Mitchell G., Ackerley C., Robinson B.H. (2004). The role of the LRPPRC (leucine-rich pentatricopeptide repeat cassette) gene in cytochrome oxidase assembly: mutation causes lowered levels of COX (cytochrome c oxidase) I and COX III mRNA. Biochem. J. 382: 331—336. PMID 15139850 DOI:10.1042/BJ20040469
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 14: 2121—2127. 2004. PMID 15489334 DOI:10.1101/gr.2596504
- Hou J., Wang F., McKeehan W.L. (1994). Molecular cloning and expression of the gene for a major leucine-rich protein from human hepatoblastoma cells (HepG2). In Vitro Cell. Dev. Biol. Anim. 30A: 111—114. PMID 8012652 DOI:10.1007/BF02631402
- Mili S., Shu H.J., Zhao Y., Pinol-Roma S. (2001). Distinct RNP complexes of shuttling hnRNP proteins with pre-mRNA and mRNA: candidate intermediates in formation and export of mRNA. Mol. Cell. Biol. 21: 7307—7319. PMID 11585913 DOI:10.1128/MCB.21.21.7307-7319.2001
- Liu L., McKeehan W.L. (2002). Sequence analysis of LRPPRC and its SEC1 domain interaction partners suggests roles in cytoskeletal organization, vesicular trafficking, nucleocytosolic shuttling, and chromosome activity. Genomics. 79: 124—136. PMID 11827465 DOI:10.1006/geno.2001.6679
- Mili S., Pinol-Roma S. (2003). LRP130, a pentatricopeptide motif protein with a noncanonical RNA-binding domain, is bound in vivo to mitochondrial and nuclear RNAs. Mol. Cell. Biol. 23: 4972—4982. PMID 12832482 DOI:10.1128/MCB.23.14.4972-4982.2003
Примітки
- Human PubMed Reference:.
- Mouse PubMed Reference:.
- HUGO Gene Nomenclature Commitee, HGNC:15714 (англ.) . Процитовано 6 лютого 2017.
- (англ.) . Архів оригіналу за 28 грудня 2016. Процитовано 6 лютого 2017.
Див. також
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LRPPRC angl Leucine rich pentatricopeptide repeat containing bilok yakij koduyetsya odnojmennim genom roztashovanim u lyudej na korotkomu plechi 2 yi hromosomi Dovzhina polipeptidnogo lancyuga bilka stanovit 1 394 aminokislot a molekulyarna masa 157 905 LRPPRCIdentifikatoriSimvoliLRPPRC CLONE 23970 GP130 LRP130 LSFC leucine rich pentatricopeptide repeat containing MC4DN5Zovnishni ID OMIM 607544 MGI 1919666 HomoloGene 32695 GeneCards LRPPRCOntologiya genaMolekulyarna funkciya GO 0001948 GO 0016582 protein binding single stranded DNA binding microtubule binding ubiquitin protein ligase binding beta tubulin binding actin filament binding DNA binding endonuclease activity RNA bindingKlitinna komponenta condensed nuclear chromosome nuclear inner membrane mitochondrial nucleoid perinuclear region of cytoplasm citoplazma citoskelet nukleoplazma mikrotrubochka nuclear outer membrane membrana mitohondriya klitinne yadro RibonukleoproteyiniBiologichnij proces GO 0009373 regulation of transcription DNA templated mRNA transport mitochondrion transport along microtubule transcription DNA templated negative regulation of mitochondrial RNA catabolic process regulation of mitochondrial translation GO 0016547 Redaguvannya RNK nucleic acid phosphodiester bond hydrolysis GO 0015915 transportDzherela Amigo QuickGOShablon ekspresiyiBilshe danihOrtologiVidi Lyudina MishaEntrez10128 72416Ensembl ENSG00000138095 ENSMUSG00000024120UniProt P42704 Q6PB66RefSeq mRNK NM 133259NM 028233RefSeq bilok NP 573566NP 082509Lokus UCSC Hr 2 43 89 44 MbHr 17 85 01 85 1 MbPubMed searchVikidaniDiv Red dlya lyudejDiv Red dlya mishej Poslidovnist aminokislot1020304050 MAALLRSARWLLRAGAAPRLPLSLRLLPGGPGRLHAASYLPAARAGPVAG GLLSPARLYAIAAKEKDIQEESTFSSRKISNQFDWALMRLDLSVRRTGRI PKKLLQKVFNDTCRSGGLGGSHALLLLRSCGSLLPELKLEERTEFAHRIW DTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTY QRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMEN AENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKSELHL MDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVTEKL EDVALQILLACPVSKEDGPSVFGSFFLQHCVTMNTPVEKLTDYCKKLKEV QMHSFPLQFTLHCALLANKTDLAKALMKAVKEEGFPIRPHYFWPLLVGRR KEKNVQGIIEILKGMQELGVHPDQETYTDYVIPCFDSVNSARAILQENGC LSDSDMFSQAGLRSEAANGNLDFVLSFLKSNTLPISLQSIRSSLLLGFRR SMNINLWSEITELLYKDGRYCQEPRGPTEAVGYFLYNLIDSMSDSEVQAK EEHLRQYFHQLEKMNVKIPENIYRGIRNLLESYHVPELIKDAHLLVESKN LDFQKTVQLTSSELESTLETLKAENQPIRDVLKQLILVLCSEENMQKALE LKAKYESDMVTGGYAALINLCCRHDKVEDALNLKEEFDRLDSSAVLDTGK YVGLVRVLAKHGKLQDAINILKEMKEKDVLIKDTTALSFFHMLNGAALRG EIETVKQLHEAIVTLGLAEPSTNISFPLVTVHLEKGDLSTALEVAIDCYE KYKVLPRIHDVLCKLVEKGETDLIQKAMDFVSQEQGEMVMLYDLFFAFLQ TGNYKEAKKIIETPGIRARSARLQWFCDRCVANNQVETLEKLVELTQKLF ECDRDQMYYNLLKLYKINGDWQRADAVWNKIQEENVIPREKTLRLLAEIL REGNQEVPFDVPELWYEDEKHSLNSSSASTTEPDFQKDILIACRLNQKKG AYDIFLNAKEQNIVFNAETYSNLIKLLMSEDYFTQAMEVKAFAETHIKGF TLNDAANSRLIITQVRRDYLKEAVTTLKTVLDQQQTPSRLAVTRVIQALA MKGDVENIEVVQKMLNGLEDSIGLSKMVFINNIALAQIKNNNIDAAIENI ENMLTSENKVIEPQYFGLAYLFRKVIEEQLEPAVEKISIMAERLANQFAI YKPVTDFFLQLVDAGKVDDARALLQRCGAIAEQTPILLLFLLRNSRKQGK ASTVKSVLELIPELNEKEEAYNSLMKSYVSEKDVTSAKALYEHLTAKNTK LDDLFLKRYASLLKYAGEPVPFIEPPESFEFYAQQLRKLRENSS A Alanin C Cisteyin D Asparaginova kislota E Glutaminova kislota F Fenilalanin G Glicin H Gistidin I Izolejcin K Lizin L Lejcin M Metionin N Asparagin P Prolin Q Glutamin R Arginin S Serin T Treonin V Valin W Triptofan Y Tirozin Zadiyanij u takih biologichnih procesah yak transkripciya regulyaciya transkripciyi transport transport mRNK Bilok maye sajt dlya zv yazuvannya z DNK RNK Lokalizovanij u yadri membrani mitohondriyi LiteraturaXu F Morin C Mitchell G Ackerley C Robinson B H 2004 The role of the LRPPRC leucine rich pentatricopeptide repeat cassette gene in cytochrome oxidase assembly mutation causes lowered levels of COX cytochrome c oxidase I and COX III mRNA Biochem J 382 331 336 PMID 15139850 DOI 10 1042 BJ20040469 The status quality and expansion of the NIH full length cDNA project the Mammalian Gene Collection MGC Genome Res 14 2121 2127 2004 PMID 15489334 DOI 10 1101 gr 2596504 Hou J Wang F McKeehan W L 1994 Molecular cloning and expression of the gene for a major leucine rich protein from human hepatoblastoma cells HepG2 In Vitro Cell Dev Biol Anim 30A 111 114 PMID 8012652 DOI 10 1007 BF02631402 Mili S Shu H J Zhao Y Pinol Roma S 2001 Distinct RNP complexes of shuttling hnRNP proteins with pre mRNA and mRNA candidate intermediates in formation and export of mRNA Mol Cell Biol 21 7307 7319 PMID 11585913 DOI 10 1128 MCB 21 21 7307 7319 2001 Liu L McKeehan W L 2002 Sequence analysis of LRPPRC and its SEC1 domain interaction partners suggests roles in cytoskeletal organization vesicular trafficking nucleocytosolic shuttling and chromosome activity Genomics 79 124 136 PMID 11827465 DOI 10 1006 geno 2001 6679 Mili S Pinol Roma S 2003 LRP130 a pentatricopeptide motif protein with a noncanonical RNA binding domain is bound in vivo to mitochondrial and nuclear RNAs Mol Cell Biol 23 4972 4982 PMID 12832482 DOI 10 1128 MCB 23 14 4972 4982 2003PrimitkiHuman PubMed Reference Mouse PubMed Reference HUGO Gene Nomenclature Commitee HGNC 15714 angl Procitovano 6 lyutogo 2017 angl Arhiv originalu za 28 grudnya 2016 Procitovano 6 lyutogo 2017 Div takozhHromosoma 2 Ce nezavershena stattya pro bilki Vi mozhete dopomogti proyektu vipravivshi abo dopisavshi yiyi